Function reference • photosynthesis

All functions
`A_supply()` `A_demand()`	CO2 supply and demand function (mol / m^2 s)
`.get_gtc()` `.get_guc()` `.get_gbc()` `.get_gmc()` `.get_gsc()`	Conductance to CO2 (mol / m^2 / s)
`FvCB()` `W_carbox()` `W_regen()` `W_tpu()`	Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model
`J()`	J: Rate of electron transport (umol/m^2/s)
`analyze_sensitivity()`	Running 2-parameter sensitivity analyses
`aq_response()`	Non-rectangular hyperbolic model of light responses
`bake()` `temp_resp1()` `temp_resp2()`	Leaf parameter temperature responses
`bake_par()`	S3 class bake_par
`baked-class`	S3 class baked
`get_f_parameter()`	Get default functions for calculated parameters in photosynthesis
`compile_data()`	Compiling outputs from lists
`compute_sensitivity()`	Computing measures of sensitivity
`constants()`	S3 class constants
`enviro_par()`	S3 class enviro_par
`fit_PV_curve()`	Fitting pressure-volume curves
`fit_aci_response()`	Fitting ACi curves
`fit_aq_response()`	Fitting light responses of net CO2 assimilation
`fit_aq_response2()`	Fit photosynthetic light-response curves
`fit_g_mc_variableJ()`	Fitting mesophyll conductance with the variable J method
`fit_gs_model()`	Fitting stomatal conductance models
`fit_hydra_vuln_curve()`	Fitting hydraulic vulnerability curves
`fit_many()`	Fitting many functions across groups
`fit_photosynthesis()`	Fit photosynthetic models with gas-exchange data
`fit_r_light_kok()` `fit_r_light_WalkerOrt()` `fit_r_light_yin()`	Estimating light respiration
`fit_r_light2()`	Fit models to estimate light respiration (\(R_\mathrm{d}\))
`fit_t_response()`	Fitting temperature responses
`gs_mod_ballberry()` `gs_mod_leuning()` `gs_mod_opti()` `gs_mod_optifull()`	Stomatal conductance models
`calculate_jmax()` `calculate_j()`	Inverse non-rectangular hyperbola for J_max calculation
`leaf_par()`	S3 class leaf_par
`make_leafpar()` `make_enviropar()` `make_bakepar()` `make_constants()`	Make lists of parameters for `photosynthesis`
`get_default_model()` `get_all_models()` `marshall_biscoe_1980()`	Get default model
`parameter_names()`	Get vector of parameter names
`photo_parameters`	Input parameters to simulate C3 photosynthesis using `photosynthesis()`
`photosynthesis-package`	`photosynthesis` package
`photosynthesis()` `photo()`	Simulate C3 photosynthesis
`ppm2pa()`	Convert pressure from PPM to Pascals
`print_graphs()`	Printing graphs to system
`read_li6800()`	Read a LI-COR file
`read_licor()`	Read a LI-COR file
`required_variables()`	Variables required for photosynthesis models
`simulate_error()`	Simulate gas exchange data with measurement error
`t_response_arrhenius()` `t_response_arrhenius_kruse()` `t_response_arrhenius_medlyn()` `t_response_arrhenius_topt()` `t_response_calc_dS()` `t_response_calc_topt()` `t_response_heskel()` `t_response_mmrt()`	Temperature response functions

Reference

All functions